People >> Francisco M. Codoner
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| Name: |
Francisco M. Codoner |
| Status: |
Postdoctoral Project Leader |
| Email: |
f.codoner uni-muenster.de |
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Curriculum
- April 2008 -- To date: Postdoctoral Project Leader at the Muenster University (Germany)
- March 2006 -- March 2008: Marie Curie Postdoctoral Researcher in Trinity College Dublin and National University of Ireland Maynooth (Ireland)
- 2006: PhD at "Instituto de Biologia Molecular y Celular de Plantas" CSIC (Spain)
- 2002: MSc at "Instituto Cavanilles de Biodiversidad y Biologia Evolutiva" University of Valencia (Spain)
- 1995 -- 2000: Bachelor in Biology at University of Valencia (Spain)
Keywords
- Molecular Evolution, Viral Evolution, Bioinformatics, Molecular Coevolution, Protein-Protein Interactions, Host-parasite Coevolution
Research Interests
- theoretical approaches to reveal the interdependency of the amino acids whithin and between proteins
- Prediction of Protein-Protein Interactions
- Viral Evolution
- Host-Parasite coevolution
Teaching
- Bioinformatics 2 (Practicals): Sequence Analysis. WWU-Muenster (2007-2008)
- Speaker at the Bernhard-Rensch Summer School (2008)
- Bioinformatics 5. WWU-Muenster (2008-2009)
- Modern Methods in Evolutionary Biology. WWU-Muenster (2008-2009)
Papers
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Elena, S.F., Codoñer, F.M. & Sanjuán, R. (2003) Intra-clonal variation in RNA virases: generation, maintenance and consequences. Biology Journal of the Linnean Society 79: 17- 26.
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Elena, SF., Codoñer, F.M., Cuevas, J.M. & Sanjuán, R. (2003) Adaptative dinamics during experimental evolution of RNA viruses. Biology International 44: 75- 78.
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Codoñer, F.M., Sanjuán, R., Moya, A. & Elena, S.F. (2004) Natural selection and the organ-specific differentiation of HIV-1 V3 hypervariable region. Evolution 58: 1185 – 1194.
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Codoñer, F.M., Cuevas, J.M., Sánchez-Navarro, J.A., Pallás, V. and Elena, S.F. (2005) Molecular Evolution of the Plant Virus Family Bromoviridae Based on RNA 3 Encoded Proteins. Journal of Molecular Evolution 61: 697-705.
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Codoñer, F.M. & Elena, S.F. (2006). Evolutionary relationships among members of the Bromoviridae deduced from whole proteome analysis. Archives in Virology 151: 299-307.
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Codoñer, F.M., Fares, M.A. & Elena S.F. (2006). Adaptative covariation between the coat and movement proteins of Prunus Necrotic Ringspot Virus. Journal of Virology 80: 5833-5840.
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Codoñer, F.M., Daròs, J.A., Solé. R.V. & Elena, S.F. (2006). The fittest versus the flattest: Experimental confirmation of the quasispecies effect with subviral pathogens. PLOS Pathogens 2: e136 doi:10.1371/journal.ppat.0020136.
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Codoñer, F.M., Bordería, A.V. & Sanjuán, R. (2007). Selection promotes organ compartimentalization in HIV-1: evidence from gag and pol genes. Evolution. 61: 272-279.
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Elena, S.F. & Codoñer, F.M. (2007). Bioinformatic tools in phytopathology. Chap. 2 in Herramientas Biotecnológicas en Fitopatología, (eds. V. Pallás, P. Rodriguez-Valenzuela, J.F. Marcos and C. Escobar) .Pp. 109-134. Mundi Prensa
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Codoñer, F.M. & Fares, M.A. (2008). Why should we care about molecular Coevolution?. Evolutionary Bioinformatics. 4: 237-246.
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Elena, S.F., Agudelo-Romero, P., Carrasco, P., Codoñer, F.M., Martín, S., Torres-Barceló, C. & Sanjuán, R. (2008). Experimental evolution of plant RNA viruses. Heredity. 100: 478-483.
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Codoñer, F.M. O’Dea, S. & Fares, M.A. (2008). Reducing the false discovery rate in the non-parametric analysis of molecular co-evolution. BMC Evol Biol. April 10, 8:106.
- Codoñer, F.M., & Elena S.F. (2008). The promiscuous evolutionary history of the Bromoviridae family. Journal of General Virology. 89: 1729-1738.
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